Showing posts with label innovation. Show all posts
Showing posts with label innovation. Show all posts

Tuesday, May 30, 2023

Accelerating Knowledge Innovation: Systematic Review of Reviews on ChatGPT

In the beginning was the Word. It was used in the creation of all other things - from thoughts to stories and histories. However, as the amount of information available grew overwhelming, it became challenging to process and make sense of it all. Early academic reformers introduced the idea of reviews and digests to help navigate this sea of information. But it wasn't until the 1970s that systematic reviews gained popularity, starting in the field of medical research.

created by Author with ChatGPT, Bing Image Creator & Photoshop

Reviews play a crucial role in consolidating a vast array of studies and publications, allowing researchers to weave together the threads of evidence and create a cohesive and informative narrative. However, traditional review processes often require substantial time and the collaboration of multiple researchers to reach a consensus. With the rise of generative AI based on large language models, the power of words can be harnessed to streamline the systematic review process, unlocking new possibilities for learning and knowledge acquisition. By leveraging the capabilities of ChatGPT, researchers can potentially accelerate the production of high-quality reviews, facilitating the dissemination of insights and advancements in various fields of study.

The use of ChatGPT in conducting a systematic review of reviews on ChatGPT itself demonstrates the potential for accelerating the production of high-quality reviews in a timely manner. 

While systematic reviews are considered to be the gold standard in knowledge synthesis, they usually require between 6 months and 2 years to complete and often have a narrow focus. While the methodological shortcuts allow rapid reviews (first mentioned in the literature in 1997) to be conducted in less time and with fewer resources, they also increase the likelihood of introducing bias into the review process and missing important information from grey literature (i.e., preprint servers). 

In 2020, full systematic review was completed by a team of 6 in 2 weeks using automation tools. The most time-consuming tasks were data extraction, write-up, abstract screening, full-text screening, and risk of bias. 4 out of the 6 people on the team were experienced systematic reviewers with complementary skills (three experts in two domains required for the review and one information specialist). 

In 2023, ChatGPT and I were able to complete the review of reviews in one week. We screened 7 large resources of papers, including grey literature and reviewed primary studies in Chinese, German, Indonesian, Norwegian, Portuguese, Russian, and Spanish, in addition to English. 

ChatGPT helped me to filter relevant literature in all languages, extract key information, summarize findings, and even assisted with the synthesis of the overall review, enabling a more efficient and comprehensive analysis.

Our paper illustrates that ChatGPT is expanding into different domains and highlights the need to continually refine and expand the training datasets, ensuring that they are diverse and accurate. Another area of improvement involves developing customized integrations, designing specialized prompt instructions and involvement of domain-specific expert trainers, factual correctness evaluation, and investigation of societal impact.  

Word by word, paper by paper, and review by review, ChatGPT is paving the way for a future where knowledge creation is accelerated, insights are amplified, and breakthroughs are within closer reach.


REFERENCE

Gabashvili I.S. The impact and applications of ChatGPT: a systematic review of literature reviews. Submitted on May 8, 2023. arXiv:2305.18086 [cs.CY]. https://doi.org/10.48550/arXiv.2305.18086

Saturday, July 17, 2010

Collaboration 2.0


Information technology is letting people around the world come together in unprecedented ways. Wikis, blogs and microblogs like twitter, 
crowdsourcing and crowd-task-solving sites continue to flatten the planet.  
Scientific innovation used to be a very private endeavor, with narrowly specialized scientists delving deeply into specific research areas.  The Internet changed some of this giving rise to Wikipedia  - now orders of magnitude larger than the Encyclopedia Britannica, and similar wiki resources for gene annotations, RNA libraries, radiology images, open-source software and other content.
 
Science funding agencies may appear to be crowdsourcing solutions too - as they employ broad calls for proposals and utilize peer reviews to evaluate the proposed ideas. Their models , however, are not very effective in triggering societal impacts. They impede collaboration in many ways as the researchers are not truly working together and the feedback is not constructive. Reviewers are experts but not direct stakeholders of  proposed projects . They add management overhead (Latour, 1996).

One may argue that science is highly competitive and will always be driven by egos and desire for personal vs collective success. Yet, as Johnston and Hauser note, these very human needs could be met by more efficiently designed open source models, extending beyond snapshots of consensus,  enabling to capture specific contributions of each participant and  permanent record of the life history of the project from conception to completion.

The ease of discovery declines every year - scientists have to search for smaller asteroids, heavier chemical elements and more complicated connections. This has to be matched with either exponential increase in the number of scientists or more innovative collaboration.

People take pleasure in synchronized activities - such as singing or marching together, folding proteins or syncing their brains in a conversation.  Could scientists have meaningful conversations on unimaginable scales, conversations including citizen scientists and people whose health needs could be solved by science?
Some researchers are already using help from crowds collecting their donations to support research - like the recently started open-source research project to develop cure for neglected tropical disease schistosomiasis.
Or the Open Source PCR project supported by the public.

Recent call for collaboration asked for a framework to exchange and disseminate information,  produce guidelines and summarize finding for Participatory health research (PHR) addressing local health issues. Government agencies are using twitter and expect crowds to supply epidemiological metrics to test health policy efficacy.
Meanwhile, many are already utilizing google docs in the quest for collaborators and exchange of ideas. See for example this Folder of Useful Google Docs including:

Or check this call for collaborations in the microbiome and metabolome spaces, to solve neglected medical conditions.

Scientists, let's unite and start collaborating in even more creative ways!

ResearchBlogging.org


References 

Johnston SC, & Hauser SL (2009). Crowdsourcing scientific innovation. Annals of neurology, 65 (6) PMID: 19562693 
Wright MT, Roche B, von Unger H, Block M, & Gardner B (2010). A call for an international collaboration on participatory research for health. Health promotion international, 25 (1), 115-22 PMID: 19854843

Auer S, Braun-Thurmann H. Towards bottom-up, stakeholder-driven research funding — open science and open peer review: Available at:  http://www.informatik.uni-leipzig.de/~auer/publication/OpenScience.pdf.  Accessed May 21, 2009 

Lawrence PA (2009) Real Lives and White Lies in the Funding of Scientific Research. PLoS Biol 7(9): e1000197. doi:10.1371/journal.pbio.1000197


Marsh A, Carroll D, & Foggie R (2010). Using collective intelligence to fine-tune public health policy. Studies in health technology and informatics, 156, 13-8 PMID: 20543334 

Huss JW 3rd, Lindenbaum P, Martone M, Roberts D, Pizarro A, Valafar F, Hogenesch JB, & Su AI (2010). The Gene Wiki: community intelligence applied to human gene annotation. Nucleic acids research, 38 (Database issue) PMID: 19755503 

Latour, B. 1996. Aramis, or, The love of technology Harvard University Press, Cambridge, Mass 
Butler, D. (2010). Open-source science takes on neglected disease Nature DOI: 10.1038/news.2010.50
Facebook page, Just giving fundraiser page


Scientific collaboration: 
Idea Generation and Solving:

Crowd-Task-Solving and Freelance

  • World4brains, collaboration instead of competition for best ideas, advice and solutions - innovative payment system rewards all valuable input given
  • TaskRabbit,  linking over-stretched consumers with runners for errands, tasks and other to-do’s
  • oDesk - global marketplace for remote work
  • Elance - freelance marketplace
  • Guru - freelance community
  • Ki Work - sourcing online work
  • Amazon Mechanical Turk - micro-task crowdsourcing
  • HumanGrid - small online tasks solving
     

Crowd-Funding

     
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